# List of top-scoring protein chains for t2k-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1xrjA	261	0.3115	c.37.1.6	122256
1uj2A	252	6.490	c.37.1.6	99452
3ljkA	543	8.674		
2cxnA	557	9.545		
2c12A	439	10.14	a.29.3.1,e.6.1.1	129616,129617
1h0cA	392	13.95	c.67.1.3	83424
1p3wA	404	15.81	c.67.1.3	87752
2od4A	101	24.40	d.58.4.20	148734
1elqA	390	27.28	c.67.1.3	34436
3hjbA	574	27.83		
2oa4A	101	34.86	a.4.12.3	148690
3d19A	283	43.79	a.29.13.1,a.29.13.1	157176,157177
3dffA	273	51.61		
1iatA	557	53.54	c.80.1.2	62123
1qhfA	240	55.55	c.60.1.1	33960
2ejwA	332	61.77		
2avwA	311	64.90		
1eluA	390	64.90	c.67.1.3	34434
1u0tA	307	65.07	e.52.1.1	107567
1wymA	155	65.47		
1snrA	341	66.61	b.6.1.3,b.6.1.3	105823,105824
1j6rA	214	67.39	d.173.1.2	71598
2amuA	143	70.11		
1qhlA	227	71.90	c.37.1.12	32382
3cihA	739	82.19		
3fc7A	125	82.20		
1u0fA	564	84.41	c.80.1.2	112912
2jynA	146	89.22