# List of top-scoring protein chains for t2k-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1xrjA	261	0.3240	c.37.1.6	122256
1uj2A	252	4.975	c.37.1.6	99452
1p3wA	404	12.71	c.67.1.3	87752
1elqA	390	13.25	c.67.1.3	34436
2cxnA	557	15.59		
2c12A	439	16.65	a.29.3.1,e.6.1.1	129616,129617
3ljkA	543	17.77		
3hjbA	574	19.75		
1eluA	390	21.93	c.67.1.3	34434
1okcA	297	22.32	f.42.1.1	93248
2oa4A	101	23.55	a.4.12.3	148690
3kgxA	393	28.07		
2od4A	101	30.03	d.58.4.20	148734
1jh6A	189	38.35	d.61.1.1	66707
2hoxA	427	38.72	c.67.1.1	136644
2ejwA	332	40.52		
3dffA	273	41.49		
1h0cA	392	41.80	c.67.1.3	83424
3kgwA	393	43.62		
2avwA	311	44.19		
1qhlA	227	44.35	c.37.1.12	32382
1wymA	155	45.34		
1iatA	557	50.15	c.80.1.2	62123
1kmkA	406	55.37	c.67.1.3	68696
1j6rA	214	55.50	d.173.1.2	71598
3m5rA	133	57.67		
2hufA	393	62.73		
2z9wA	392	63.58		
1eg5A	384	65.34	c.67.1.3	34429
3dalA	196	67.72		
1wxcA	281	68.51		
1vjoA	393	72.43	c.67.1.3	100827
2zc0A	407	72.90		
3komA	663	79.30		
1bg6	359	83.99		
3i1aA	339	84.97		
2z8zA	617	87.89		
3fc7A	125	88.59