# List of top-scoring protein chains for t06-w0.5-1-pb-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1uj2A	252	1.145	c.37.1.6	99452
2dwkA	180	1.642		
1xrjA	261	3.221	c.37.1.6	122256
3g1lA	256	3.285		
1svmA	377	5.530	c.37.1.20	112126
1t56A	216	6.975	a.4.1.9,a.121.1.1	106428,106429
2avwA	311	8.676		
2oa4A	101	10.31	a.4.12.3	148690
1y08A	323	10.50	d.3.1.12	116280
2d0oB	125	11.48	c.51.3.2	131078
3a7sA	228	12.68		
3g1oA	255	12.91		
3h8lA	409	13.39		
1n45A	233	15.51	a.132.1.1	79981
3cjwA	244	18.78		
2bngA	149	19.40	d.17.4.8	146156
3gygA	289	22.28		
2j6gA	266	22.51		
2k0mA	104	24.04		
1h3fA	432	24.75	c.26.1.1,d.66.1.4	76631,76632
1okcA	297	24.82	f.42.1.1	93248
1omhA	293	26.49	d.89.1.5	93348
1n3lA	372	30.84	c.26.1.1	79966
2od4A	101	31.42	d.58.4.20	148734
2g3bA	208	32.78	a.4.1.9,a.121.1.1	134558,134559
2rkhA	180	35.24		
3e9nA	245	36.09		
3lvmA	423	41.06		
3m5rA	133	41.53		
2ahfA	377	49.52		
2whmA	385	50.67		
2i10A	202	51.02	a.4.1.9,a.121.1.1	136960,136961
2kiiA	181	52.85		
3fc6B	266	53.45		
3f27D	83	54.17		
3f5cB	268	59.81		
2os5A	119	60.49		
1wi0A	113	62.06	d.15.2.2	114657
3g1mA	236	64.19		
3llxA	376	64.32		
2ia1A	178	64.80	d.359.1.1	147583
1kjsA	74	65.78	a.50.1.1	17792
3flkA	364	66.73		
2wa0A	240	68.75		
3d19A	283	74.81	a.29.13.1,a.29.13.1	157176,157177
3bgaA	1010	78.49		
3dewA	206	79.20		
2glcA	342	81.37		
2r3iA	298	82.17		
1mwwA	128	82.70	d.80.1.4	91483
3he0A	196	88.95		
2vjxA	846	89.37	b.1.4.1,b.1.4.1,b.1.4.1,b.18.1.5,c.1.8.3	153203,153204,153205,153206,153207