# List of top-scoring protein chains for t06-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2dwkA	180	3.145		
1uj2A	252	7.104	c.37.1.6	99452
2oa4A	101	12.02	a.4.12.3	148690
3g1lA	256	13.26		
3e9nA	245	15.53		
3cjwA	244	16.46		
3h8lA	409	17.92		
1svmA	377	19.66	c.37.1.20	112126
1xrjA	261	28.65	c.37.1.6	122256
2avwA	311	29.86		
1t56A	216	30.44	a.4.1.9,a.121.1.1	106428,106429
1y08A	323	35.53	d.3.1.12	116280
2vbfA	570	38.98		
3a7sA	228	40.21		
2ahfA	377	41.71		
2bcoA	350	43.64	c.56.5.7	128302
2zmuA	223	46.64		
2iaiA	230	47.91		
2j6gA	266	49.32		
1oshA	232	51.44	a.123.1.1	93496
1t5jA	313	52.19	a.209.1.1	99125
3lw1A	253	53.89		
3g1oA	255	57.69		
2od4A	101	58.74	d.58.4.20	148734
2al6A	375	70.04	a.11.2.1,b.55.1.5,d.15.1.4	126966,126967,126968
1kskA	234	79.42	d.66.1.5,d.265.1.3	72920,90389
3gygA	289	79.53		
3fc6B	266	83.11		
3m5rA	133	85.15		
3d19A	283	86.69	a.29.13.1,a.29.13.1	157176,157177
3f5cB	268	86.74