# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2dwkA	180	2.834		
1uj2A	252	13.55	c.37.1.6	99452
3b8mA	280	14.41	d.58.60.1	154961
1svmA	377	22.86	c.37.1.20	112126
2avwA	311	24.83		
2rkhA	180	30.73		
1xrjA	261	32.15	c.37.1.6	122256
3hywA	430	32.40		
2ia1A	178	35.16	d.359.1.1	147583
1y08A	323	38.60	d.3.1.12	116280
3h8lA	409	39.90		
3kbuA	326	45.50		
3aaiA	94	53.43		
3m5rA	133	67.07		
3lmbA	165	72.44		
1jqnA	883	72.47	c.1.12.3	77159
2oa4A	101	72.89	a.4.12.3	148690
1bccF	109	73.62	f.27.1.1	43700
3dlkA	556	75.21		
3f27D	83	76.47		
2zd1A	557	82.79