# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2dwkA	180	3.790		
1uj2A	252	4.339	c.37.1.6	99452
1svmA	377	15.48	c.37.1.20	112126
2ahfA	377	16.12		
1xrjA	261	19.43	c.37.1.6	122256
3a7sA	228	19.52		
2oa4A	101	20.89	a.4.12.3	148690
3h8lA	409	21.31		
3e9nA	245	22.65		
1okcA	297	24.50	f.42.1.1	93248
2vbfA	570	25.87		
3cjwA	244	25.94		
2avwA	311	29.46		
2wa0A	240	36.93		
3d19A	283	38.57	a.29.13.1,a.29.13.1	157176,157177
1y08A	323	47.12	d.3.1.12	116280
2nxwA	565	48.87		
3bgaA	1010	52.54		
2paqA	201	54.51	a.211.1.1	139643
2bcoA	350	64.46	c.56.5.7	128302
1x3aA	100	68.35	a.240.1.1	121659
2k0mA	104	71.57		
1loxA	662	73.26	a.119.1.2,b.12.1.1	19238,23638
1wi0A	113	76.12	d.15.2.2	114657
2od4A	101	79.89	d.58.4.20	148734
3dbyA	269	80.23	a.29.13.1,a.29.13.1	157486,157487
2bngA	149	81.48	d.17.4.8	146156
1icxA	155	84.65	d.129.3.1	71191
3m5rA	133	84.86		
2hxtA	441	87.95