Best Alignments for T0561

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2bkwA	2.8067e+01	2bkwA/T0561-2bkwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.3
2f48A	3.0987e+01	2f48A/T0561-2f48A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.89.1.1
2dwkA	3.2359e+01	2dwkA/T0561-2dwkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i2cA	3.9466e+01	2i2cA/T0561-2i2cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oa4A	4.6586e+01	2oa4A/T0561-2oa4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.12.3
1hgxA	5.0158e+01	1hgxA/T0561-1hgxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.61.1.1
2z9wA	5.2057e+01	2z9wA/T0561-2z9wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gtvA	5.5187e+01	1gtvA/T0561-1gtvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p5zB	5.7791e+01	1p5zB/T0561-1p5zB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1oe0A	5.9562e+01	1oe0A/T0561-1oe0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cxfA	6.3509e+01	2cxfA/T0561-2cxfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.256.1.1
1hssA	6.9392e+01	1hssA/T0561-1hssA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1g79A	7.2576e+01	1g79A/T0561-1g79A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.45.1.1
2ap3A	7.3036e+01	2ap3A/T0561-2ap3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1eg5A	7.8737e+01	1eg5A/T0561-1eg5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.3
3clmA	7.9357e+01	3clmA/T0561-3clmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hgjA	8.0069e+01	3hgjA/T0561-3hgjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1okcA	8.2337e+01	1okcA/T0561-1okcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.42.1.1
1u5tA	8.5373e+01	1u5tA/T0561-1u5tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.54 a.4.5.54
2ke4A	8.5461e+01	2ke4A/T0561-2ke4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001