# List of top-scoring protein chains for t04-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2bkwA	385	7.823	c.67.1.3	128714
2z9wA	392	18.44		
2f48A	555	19.60	c.89.1.1	132915
2oa4A	101	24.64	a.4.12.3	148690
1hgxA	183	25.85	c.61.1.1	34027
2i2cA	272	26.94		
2od4A	101	32.30	d.58.4.20	148734
3kawA	140	35.19		
2dwkA	180	35.52		
1g79A	218	37.39	b.45.1.1	25752
3clmA	352	47.92		
3kgwA	393	47.94		
1f4lA	551	52.42	a.27.1.1,c.26.1.1,g.41.1.1	59648,59649,59650
1p5zB	263	53.45	c.37.1.1	87815
2ay1A	394	54.32	c.67.1.1	34357
2hufA	393	60.01		
3fc7A	125	64.63		
1f44A	324	68.91	a.60.9.1,d.163.1.1	64982,64983
3hgjA	349	69.19		
3cexA	172	69.94		
2jc7A	244	71.28		
3fv7A	244	71.98		
1o5oA	221	74.33	c.61.1.1	92509
1sr7A	259	74.86	a.123.1.1	105957
1t56A	216	75.92	a.4.1.9,a.121.1.1	106428,106429
1jpzA	473	85.54	a.104.1.1	67069
1h8dH	260	87.32