# List of top-scoring protein chains for t04-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2cxfA	190	5.436	a.256.1.1	131004
2dwkA	180	7.149		
2z9wA	392	10.09		
1h8dH	260	17.11		
2rcyA	262	27.61		
3f0hA	376	28.61		
2a5yA	204	36.47	f.1.4.1	126183
3kuzA	126	39.11		
2bkwA	385	39.68	c.67.1.3	128714
2cf8H	257	41.04		
1vzqH	250	42.25		
2ay1A	394	44.89	c.67.1.1	34357
1hgxA	183	44.94	c.61.1.1	34027
2ia1A	178	50.28	d.359.1.1	147583
1sr7A	259	51.61	a.123.1.1	105957
2bvrH	252	52.27		
2o8gI	225	52.50		
3aaiA	94	53.80		
3kbuA	326	55.51		
2ayuA	417	56.57	d.305.1.1	127571
2rjbA	455	58.26		
3m5rA	133	61.53		
1bccF	109	65.20	f.27.1.1	43700
3cexA	172	66.90		
2ke4A	98	67.15		
3c8dA	403	68.97	b.1.18.20,c.69.1.2	156025,156026
1nu7D	282	69.51	a.8.6.1,a.8.6.1	92191,92192
3dhiA	500	76.15		
1sqnA	261	78.61	a.123.1.1	105944
2i2cA	272	78.97		
1pyoB	105	79.41		
2pn8A	211	80.98		
2cx4A	164	89.94	c.47.1.10	130973