PFRMAT SS
TARGET T0561
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0561.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 4
METHOD
MODEL 1
V C 0.996
E C 0.792
K C 0.393
K H 0.306
K H 0.306
Y H 0.300
L C 0.355
D C 0.415
S H 0.723
E H 0.762
F H 0.686
L H 0.713
L H 0.657
H H 0.573
C H 0.442
I H 0.346
S C 0.416
A H 0.878
Q H 0.925
L H 0.964
L H 0.977
D H 0.972
M H 0.978
W H 0.983
K H 0.979
Q H 0.966
A H 0.952
R H 0.955
A H 0.968
R H 0.954
W H 0.981
L H 0.987
E H 0.971
L H 0.926
V H 0.929
G H 0.961
K H 0.962
E H 0.959
W H 0.965
A H 0.957
H H 0.938
M H 0.903
L H 0.840
A H 0.649
L H 0.420
N C 0.767
P T 0.367
E T 0.348
R C 0.309
K C 0.449
D C 0.448
F C 0.383
L C 0.499
W C 0.451
K C 0.456
N C 0.399
Q C 0.454
S C 0.291
E H 0.349
M H 0.620
N H 0.775
S H 0.873
A H 0.850
F H 0.846
F H 0.789
D H 0.793
L H 0.901
C H 0.953
E H 0.949
V H 0.965
G H 0.957
K H 0.931
Q H 0.905
V H 0.906
M H 0.796
L H 0.674
G H 0.480
L H 0.279
L T 0.365
G T 0.373
K S 0.297
E C 0.374
V C 0.452
A C 0.563
L C 0.729
P H 0.367
K H 0.583
E H 0.554
E H 0.716
Q H 0.807
A H 0.891
F H 0.947
W H 0.986
I H 0.992
M H 0.992
Y H 0.989
A H 0.981
V H 0.952
H H 0.925
L H 0.926
S H 0.925
A H 0.901
A H 0.911
C H 0.883
A H 0.876
E H 0.861
E H 0.721
L T 0.414
H T 0.453
M C 0.931
E C 0.636
V C 0.306
A C 0.424
M C 0.401
S C 0.366
L H 0.290
R H 0.338
K E 0.427
L E 0.433
N E 0.649
V E 0.669
K E 0.709
L E 0.537
K E 0.322
D C 0.473
F T 0.423
N T 0.311
F C 0.327
G C 0.359
G C 0.379
T C 0.380
R E 0.502
Y E 0.465
F C 0.362
K S 0.340
D S 0.429
M C 0.650
P C 0.823
P H 0.417
E H 0.678
E H 0.659
K H 0.853
K H 0.859
R H 0.896
R H 0.933
M H 0.939
E H 0.937
R H 0.921
K H 0.940
Q H 0.947
R H 0.954
I H 0.966
E H 0.974
E H 0.965
A H 0.947
R H 0.919
R H 0.827
H H 0.578
G C 0.318
M C 0.884
P C 0.999
END