T0561.t2k.100-30-str

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
3fvyA	728	2.70e-01
2v6kA	214	4.36e-01
3d7eO	505	6.48e-01
1yrbA	262	7.66e-01		c.37.1.10
1xxsA	122	1.15e+00
2j1dG	483	1.16e+00
1y4lA	121	2.67e+00		a.133.1.2
2vdxA	373	2.68e+00
1zeeA	403	2.76e+00		a.266.1.2
1xqoA	256	2.80e+00		a.96.1.6
1vbgA	876	3.42e+00		c.1.12.2
				c.8.1.1
				d.142.1.5
3iq3A	121	3.68e+00
1tr0A	108	4.19e+00		d.58.4.4
3fd9A	256	4.51e+00
2d29A	387	4.56e+00		a.29.3.1
				e.6.1.1
1s8iA	121	4.62e+00		a.133.1.2
3f7cA	200	4.73e+00
2wtgA	159	4.84e+00
2hzgA	401	5.13e+00
2dxnA	274	5.32e+00		d.159.1.11
2r1fA	270	5.91e+00
1u5tA	233	6.33e+00		a.4.5.54
				a.4.5.54
1clxA	347	6.77e+00	1taxA	c.1.8.3
3clmA	352	6.98e+00
3h46O	506	7.34e+00
1w32A	348	7.51e+00		c.1.8.3
1mn8A	100	7.61e+00		a.61.1.6
3eheA	313	7.83e+00
2g47A	990	7.91e+00
2ahfA	377	7.96e+00
2iksA	293	8.29e+00
1vmbA	140	8.29e+00		d.58.14.1
2b5tI	432	8.30e+00		e.1.1.1
1adjA	421	8.52e+00	1adjA	c.51.1.1
				d.104.1.1
3hyhA	275	8.55e+00
1vd5A	377	8.65e+00		a.102.1.7
2v95A	371	8.82e+00
3d03A	274	8.84e+00		d.159.1.11
1yuzA	202	8.92e+00		a.25.1.1
				g.41.5.1
1h4vB	421	8.92e+00	1adjA	c.51.1.1
				d.104.1.1
1oglA	283	9.16e+00		a.204.1.1
2pg0A	385	9.28e+00
1dciA	275	9.40e+00	1dciA	c.14.1.3
2waoA	341	9.60e+00
2of3A	266	9.68e+00
2whxA	618	9.75e+00
1guxA	218	1.00e+01	1guxA	a.74.1.3
1nfkA	325	1.03e+01	1a3qA	b.1.18.1
				b.2.5.3
3a04A	372	1.03e+01
1lucB	324	1.05e+01	1lucA	c.1.16.1
2vtyA	182	1.05e+01
3g7sA	549	1.07e+01
2wabA	341	1.07e+01
2nwbA	400	1.08e+01
2q2jA	121	1.08e+01
1qgrA	876	1.10e+01	1qgrA	a.118.1.1
2rccA	346	1.10e+01
1eu8A	409	1.16e+01	1eu8A	c.94.1.1
2jlqA	451	1.16e+01
2jfkA	433	1.17e+01
3h3nO	506	1.18e+01
3f75P	106	1.19e+01
6gsvA	217	1.22e+01	1b8xA	a.45.1.1
				c.47.1.5
2ps2A	371	1.25e+01
2zo9B	274	1.28e+01		d.159.1.11
3kcgI	432	1.31e+01
3b9fI	395	1.33e+01
1uwsA	489	1.35e+01		c.1.8.4
3hhdA	965	1.37e+01
1bedA	181	1.37e+01		c.47.1.13
1wmuA	141	1.40e+01		a.1.1.2
1aquA	297	1.45e+01	1aquA	c.37.1.5
1zd1A	284	1.46e+01
1pw4A	451	1.47e+01		f.38.1.1
3es7A	391	1.52e+01
3ledA	392	1.52e+01
1ef1A	294	1.52e+01	1ef1A	a.11.2.1
				b.55.1.5
				d.15.1.4
2idxA	196	1.53e+01
3mddA	385	1.55e+01	3mdeA	a.29.3.1
				e.6.1.1
2aaxA	275	1.60e+01
1kyhA	276	1.65e+01		c.72.1.4
1mdwA	328	1.66e+01		d.3.1.3
2vjvA	159	1.68e+01		d.58.57.1
1glqA	209	1.74e+01	1pgtA	a.45.1.1
				c.47.1.5
1r9dA	787	1.75e+01		c.7.1.1
3mdeA	385	1.76e+01	3mdeA	a.29.3.1
				e.6.1.1

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1qfjA	232	1.78e+01	1qfjA	b.43.4.2
				c.25.1.1
3bniA	229	1.86e+01
3ky9A	587	1.89e+01
3flcO	518	1.91e+01
2bv5A	282	1.91e+01
2hw2A	143	1.92e+01
2a6mA	155	1.94e+01		d.58.57.1
2hsbA	126	1.99e+01
3ci3A	194	2.01e+01
2j5bA	348	2.06e+01
1vapA	123	2.07e+01	1poa	a.133.1.2
2hbvA	334	2.11e+01		c.1.9.15
2hlyA	207	2.17e+01		d.3.1.19
3euhC	234	2.21e+01
2wvvA	450	2.23e+01
1ivhA	394	2.24e+01	3mdeA	a.29.3.1
				e.6.1.1
1zx4A	192	2.28e+01
2q8xA	331	2.32e+01
1n82A	331	2.32e+01		c.1.8.3
1zq1C	633	2.32e+01		a.182.1.2
				d.74.4.1
				d.128.1.5
2olmA	140	2.34e+01
2ah6A	208	2.35e+01
2v57A	190	2.38e+01
1rp3A	239	2.47e+01		a.4.13.1
				a.4.13.2
				a.177.1.1
2zhzA	183	2.47e+01
2qezA	455	2.48e+01
1rx0A	393	2.49e+01		a.29.3.1
				e.6.1.1
2q8uA	336	2.54e+01
3bs4A	260	2.60e+01
2dobA	83	2.63e+01
1phkA	298	2.64e+01		d.144.1.7
2nt8A	223	2.67e+01
2ds2B	72	2.67e+01
1dceB	331	2.67e+01	1dceB	a.102.4.3
3dssB	331	2.73e+01		a.102.4.3
1qhlA	227	2.73e+01	1qhlA	c.37.1.12
3kd6A	313	2.74e+01
1yx4A	132	2.75e+01
2vywA	148	2.81e+01
3eciA	122	2.83e+01
1ku2A	241	2.83e+01		a.4.13.1
				a.177.1.1
1lc5A	364	2.90e+01		c.67.1.1
1j6oA	268	2.91e+01		c.1.9.12
1a91	79	2.97e+01	1a91
1abbA	828	3.00e+01	1a8i	c.87.1.4
2dyjA	95	3.01e+01		d.52.7.1
1zy4A	303	3.04e+01
3bblA	287	3.12e+01
2ovrB	445	3.15e+01		a.158.1.1
				b.69.4.1
2zq0A	738	3.17e+01
1r5jA	337	3.23e+01		c.77.1.5
1jq4A	98	3.24e+01		d.15.4.2
1i5nA	146	3.24e+01	1i5nA	a.24.10.3
2qtwA	124	3.29e+01
2pmwA	126	3.32e+01
3abbA	408	3.32e+01
3ctvA	110	3.35e+01
1elqA	390	3.36e+01	1elqA	c.67.1.3
1eluA	390	3.39e+01	1elqA	c.67.1.3
1syyA	346	3.40e+01		a.25.1.2
1aqwA	209	3.41e+01	1pgtA	a.45.1.1
				c.47.1.5
1b4pA	217	3.41e+01		a.45.1.1
				c.47.1.5
1wy1A	172	3.43e+01
2w2eA	279	3.45e+01
3brnA	157	3.45e+01
1l6tA	79	3.48e+01		f.17.1.1
2oayA	391	3.55e+01
3i6yA	280	3.55e+01
2ga9D	469	3.56e+01		e.69.1.1
1u14A	172	3.57e+01		c.51.4.3
1hfoA	113	3.58e+01		d.80.1.3
2wm5A	435	3.58e+01
2dkoB	103	3.72e+01
1evsA	187	3.73e+01	1evsA	a.26.1.1
1vjyA	303	3.77e+01		d.144.1.7
2ol2A	395	3.78e+01
1fewA	184	3.79e+01	1fewA	a.7.4.1
2q83A	346	3.80e+01
3gajA	187	3.90e+01
3fcxA	282	3.95e+01
3ii6X	263	3.95e+01

Please cite the following papers:

Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001
Karplus, K. and Karchin, R. and Draper, J. and Casper, J. and Mandel-Gutfreund, Y. and Diekhans, M. and Hughey, R. ``Combining local-structure, fold-recognition, and new-fold methods for protein structure prediction'' Proteins: Structure Function and Genetics53(S6):491-496,15 Oct 2003
Rachel Karchin, Melissa Cline, Yael Mandel-Gutfreund, and Kevin Karplus. ``Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.'' Proteins: Structure, Function, and Genetics, 51(4):504--514, June 2003.