Best Alignments for T0558

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3hxjA	9.8882e-14	3hxjA/T0558-3hxjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1q7fA	6.7930e-13	1q7fA/T0558-1q7fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.68.9.1
3emhA	2.2886e-11	3emhA/T0558-3emhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gxrA	2.5297e-11	1gxrA/T0558-1gxrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.4.1
2h14A	3.4779e-11	2h14A/T0558-2h14A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1l0qA	3.9109e-11	1l0qA/T0558-1l0qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.3.1 b.69.2.3
2z2nA	4.5304e-11	2z2nA/T0558-2z2nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3fvzA	4.9476e-11	3fvzA/T0558-3fvzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gnqA	5.0263e-11	2gnqA/T0558-2gnqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a0rB	9.4515e-11	1a0rB/T0558-1a0rB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.4.1
1nr0A	9.6098e-11	1nr0A/T0558-1nr0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.4.1 b.69.4.1
2p4oA	1.0255e-10	2p4oA/T0558-2p4oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.68.6.3
1r5mA	1.0614e-10	1r5mA/T0558-1r5mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qc5A	1.2087e-10	2qc5A/T0558-2qc5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3frxA	1.6130e-10	3frxA/T0558-3frxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pbiB	1.7608e-10	2pbiB/T0558-2pbiB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gotB	2.9811e-10	1gotB/T0558-1gotB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.4.1
2bcjB	3.6159e-10	2bcjB/T0558-2bcjB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.4.1
3dxkC	3.7963e-10	3dxkC/T0558-3dxkC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pguA	3.8901e-10	1pguA/T0558-1pguA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.4.1 b.69.4.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001