Best Alignments for T0558

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2j04B	1.1826e-31	2j04B/T0558-2j04B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oajA	1.0679e-30	2oajA/T0558-2oajA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nr0A	1.3871e-30	1nr0A/T0558-1nr0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.4.1 b.69.4.1
2z2nA	6.5749e-27	2z2nA/T0558-2z2nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qc5A	6.7531e-27	2qc5A/T0558-2qc5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3e0cA	2.3367e-26	3e0cA/T0558-3e0cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ei4B	3.5790e-26	3ei4B/T0558-3ei4B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gnqA	5.3580e-26	2gnqA/T0558-2gnqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bcjB	5.3914e-26	2bcjB/T0558-2bcjB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.4.1
3emhA	6.1785e-26	3emhA/T0558-3emhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hxjA	6.1961e-26	3hxjA/T0558-3hxjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h14A	7.5524e-26	2h14A/T0558-2h14A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3fvzA	8.6848e-26	3fvzA/T0558-3fvzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3dxkC	1.1522e-25	3dxkC/T0558-3dxkC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3dsmA	3.9486e-25	3dsmA/T0558-3dsmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gxrA	4.3819e-25	1gxrA/T0558-1gxrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.4.1
1lrwA	4.9320e-25	1lrwA/T0558-1lrwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.70.1.1
2pbiB	6.5770e-25	2pbiB/T0558-2pbiB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yfqA	6.9921e-25	1yfqA/T0558-1yfqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.4.2
3frxA	7.5345e-25	3frxA/T0558-3frxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001