# List of top-scoring protein chains for t2k-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3lmmA	583	6.04e-09		
1t3bA	211	29.46	c.47.1.9,d.17.3.1	106341,106342
3c8nA	356	29.51		
1a0iA	348	36.57	b.40.4.6,d.142.2.1	25363,41577
3ebvA	302	36.60		
1wxxA	382	47.21	b.122.1.9,c.66.1.51	121418,121419
3b7yA	153	53.22		
1cnvA	299	58.95	c.1.8.5	28989
2r4qA	106	60.16	c.44.2.2	151580
1pfzA	380	63.51	b.50.1.2	26881
2r48A	106	66.25	c.44.2.2	151575
1wcuA	153	73.98		
1tc5A	194	84.24	c.110.1.1	106752