# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3lmmA	583	2.08e-09		
3c8nA	356	22.22		
1t3bA	211	36.00	c.47.1.9,d.17.3.1	106341,106342
1oygA	447	43.28	b.67.2.2	93726
3b7yA	153	44.63		
1af6A	421	62.56	f.4.3.2	43772
1bh6A	274	66.91	c.41.1.1	32487
3juuA	280	69.63		
2i7gA	376	71.00		
2q22A	139	73.24	d.365.1.1	150008
3fo5A	258	76.95		
1to2E	281	77.53	c.41.1.1	112595
3m05A	114	79.10		
2b81A	323	79.83		
1y6nL	145	89.18	a.26.1.3	144600