# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3lmmA	583	7.35e-15		
2uy2A	294	12.76		
1wcuA	153	14.01		
1iwdA	215	15.27	d.3.1.1	83756
1t82A	155	15.59	d.38.1.5	106639
3d9rA	135	17.44	d.17.4.27	157459
1tkeA	224	17.92	d.15.10.1,d.67.1.1	112470,112471
3gfkA	131	18.67		
1shyB	551	19.70	b.69.12.1,g.16.2.1	105565,105566
2cfmA	561	20.69		
1r3eA	309	21.33	b.122.1.1,d.265.1.2	96907,96908
2cxcA	144	24.93		
3c8nA	356	37.95		
3bfrA	215	39.62		
3ebtA	132	42.39	d.17.4.9	158086
2dwcA	433	43.64		
2nybA	192	43.74	a.2.11.1,d.44.1.1	138804,138805
1cptA	428	45.03	a.104.1.1	18968
3cbgA	232	55.73		
3dmcA	134	60.23	d.17.4.10	157805
2gojA	197	60.59		
1gmyA	261	62.53	d.3.1.1	76236
3h51A	156	62.70		
2pzmA	330	65.90		
3k0zA	159	66.84		
2wvbA	148	68.24		
2pvuA	272	71.00		
3hduA	157	71.17		
2awpA	198	75.41		
1yalA	218	76.43	d.3.1.1	37025
3mbfA	342	76.86		
1tuhA	156	82.35	d.17.4.11	107345
2d74B	148	83.09		
2wvfA	148	83.24		
3hhaA	220	84.12		
1iscA	192	86.86	a.2.11.1,d.44.1.1	15733,38726