T0557.t2k.100-30-str

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
3lmmA	583	2.42e-05
1yzgA	179	3.44e-01		c.37.1.8
1x9nA	688	1.18e+00		a.235.1.1
				b.40.4.6
				d.142.2.1
3l2nA	395	1.32e+00
1o3yA	166	1.40e+00		c.37.1.8
1m2oB	190	1.66e+00		c.37.1.8
1ln1A	214	1.67e+00		d.129.3.2
2qtfA	364	1.89e+00
2w83A	165	1.99e+00
2dyiA	162	2.34e+00
2gu3A	136	2.49e+00		d.17.1.6
				d.17.1.6
2a5dA	175	2.63e+00		c.37.1.8
1kobA	387	3.28e+00	1tkiA	d.144.1.7
1oygA	447	3.44e+00		b.67.2.2
3ckwA	304	3.98e+00
1hh1A	143	3.98e+00	1gefA	c.52.1.18
2w02A	620	4.10e+00
2a6tA	271	4.44e+00		a.242.1.1
				d.113.1.7
3dawB	164	4.59e+00
1hw7A	255	4.61e+00	1i7fA	d.193.1.1
1uptA	171	4.72e+00		c.37.1.8
2cxcA	144	4.77e+00
1wcuA	153	5.11e+00
1kshA	186	5.13e+00		c.37.1.8
2qkmB	266	5.18e+00
3glaA	100	5.64e+00
3kg7A	293	5.77e+00
3fqgA	360	6.26e+00
1m2rA	327	6.41e+00		d.144.1.7
3c0iA	351	6.59e+00
1e8oB	106	6.61e+00	1914	d.49.1.1
3hmiA	292	7.29e+00
2gcoA	201	7.90e+00
1om1A	332	8.15e+00		d.144.1.7
2f57A	317	8.21e+00
1kwmA	402	8.39e+00		c.56.5.1
				d.58.3.1
3fpqA	290	8.50e+00
2ov7A	137	8.87e+00
2oxgA	108	8.88e+00
2retA	103	9.17e+00		d.24.1.7
3efyA	195	9.34e+00
1o8uA	257	9.36e+00		c.14.1.3
1szoA	257	9.38e+00		c.14.1.3
1iz0A	302	9.54e+00		b.35.1.2
				c.2.1.1
1cojA	212	9.81e+00	1avmA	a.2.11.1
				d.44.1.1
2bcgY	206	9.82e+00		c.37.1.8
1ukvY	206	1.00e+01		c.37.1.8
1an7A	136	1.01e+01	1seiA	d.140.1.1
1r8sA	164	1.02e+01		c.37.1.8
1vluA	468	1.02e+01		c.82.1.1
1hl9A	449	1.04e+01		b.71.1.3
				c.1.8.11
1mkyA	439	1.08e+01		c.37.1.8
				c.37.1.8
				d.52.5.1
2p5dA	147	1.10e+01
1xtmA	175	1.13e+01
3eesA	153	1.20e+01
2gxfA	142	1.20e+01		d.17.4.22
1fngA	192	1.27e+01	1iakA	b.1.1.2
				d.19.1.1
3lxrA	185	1.31e+01
2dj5A	133	1.33e+01		c.92.1.3
1ib8A	164	1.34e+01		b.38.2.1
				d.52.4.1
1wakA	397	1.35e+01
2j7tA	302	1.39e+01
2f1nA	262	1.39e+01		d.151.1.1
2eo0A	147	1.41e+01
2h17A	181	1.42e+01
1vlmA	219	1.42e+01		c.66.1.41
2pr1A	163	1.42e+01
2vjxA	846	1.43e+01		b.1.4.1
				b.1.4.1
				b.1.4.1
				b.18.1.5
				c.1.8.3
1cfyA	143	1.44e+01	1cof	d.109.1.2
2je8A	848	1.46e+01		b.1.4.1
				b.1.4.1
				b.1.4.1
				b.18.1.5
				c.1.8.3
1ieaA	192	1.47e+01	1iakA	b.1.1.2
				d.19.1.1
1zc1A	208	1.49e+01
2p02A	396	1.53e+01		d.130.1.1
				d.130.1.1
				d.130.1.1
3aazA	229	1.56e+01
2zo4A	317	1.56e+01
1z57A	339	1.59e+01
1o20A	427	1.59e+01		c.82.1.1

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1f6bA	198	1.60e+01		c.37.1.8
2kptA	148	1.62e+01
3er7A	131	1.62e+01		d.17.4.24
2h57A	190	1.62e+01
2jbwA	386	1.66e+01		c.69.1.41
2welA	327	1.66e+01
1xtlA	175	1.66e+01
2qm4A	235	1.69e+01
3eqeA	171	1.74e+01
2vr4A	846	1.75e+01		b.1.4.1
				b.1.4.1
				b.1.4.1
				b.18.1.5
				c.1.8.3
2zs6A	205	1.87e+01
3c5jA	181	1.88e+01
1s4iA	175	1.88e+01
3lahA	188	1.91e+01
1wh0A	134	1.93e+01		b.15.1.3
2wcwA	139	1.93e+01
1vfgA	390	1.95e+01		a.173.1.1
				d.218.1.4
1u55A	188	2.01e+01		d.278.1.1
1a6aA	176	2.02e+01	1iakA	b.1.1.2
				d.19.1.1
1sjyA	159	2.09e+01		d.113.1.1
3kk8A	284	2.10e+01
2k8qA	134	2.13e+01
3fdjA	278	2.13e+01
2hziA	277	2.16e+01
3e29A	144	2.16e+01
3gwrA	144	2.18e+01
1bn7A	294	2.18e+01	1bn6A	c.69.1.8
1zk7A	467	2.22e+01
2wjiA	165	2.24e+01
3fhrA	336	2.24e+01
3fbwA	299	2.27e+01
1n0nA	199	2.27e+01		a.2.11.1
				d.44.1.1
1t4hA	290	2.29e+01		d.144.1.7
2vavA	444	2.34e+01		c.69.1.40
2vatA	444	2.37e+01		c.69.1.40
1t23A	93	2.37e+01		d.247.1.1
2zxdA	455	2.38e+01
2vgpA	284	2.41e+01
3g9xA	299	2.42e+01
3bqcA	335	2.43e+01		d.144.1.7
2ofcA	142	2.43e+01
1kmqA	184	2.46e+01		c.37.1.8
1wgpA	137	2.49e+01		b.82.3.2
1r4aA	165	2.57e+01		c.37.1.8
1pl4A	198	2.59e+01		a.2.11.1
				d.44.1.1
1rypH	205	2.59e+01		d.153.1.4
1zj6A	187	2.59e+01		c.37.1.8
2uxtA	451	2.67e+01
1aqdA	192	2.68e+01	1iakA	b.1.1.2
				d.19.1.1
3a7iA	303	2.70e+01
3d79A	179	2.72e+01
3dc6A	198	2.72e+01
2isnA	364	2.78e+01
3fwhA	299	2.82e+01
1bvoA	175	2.83e+01	1a3qA	b.2.5.3
2qpzA	103	2.86e+01
2c30A	321	2.91e+01
2ae8A	221	2.93e+01		d.14.1.9
				d.14.1.9
3gokA	334	2.93e+01
1gtkA	313	2.95e+01		c.94.1.1
				d.50.2.1
2qggA	182	2.96e+01
2bdwA	362	3.00e+01
2ffmA	91	3.02e+01		d.267.1.1
2fkbA	180	3.06e+01		d.113.1.2
1qw2A	102	3.10e+01		d.249.1.1
2gq0A	303	3.11e+01
2gumA	628	3.15e+01		e.76.1.1
1mvfD	82	3.23e+01		b.129.1.1
2abyA	146	3.26e+01
3kfaA	288	3.30e+01
1cqwA	295	3.30e+01	1b6g	c.69.1.8
1idsA	207	3.30e+01	1avmA	a.2.11.1
				d.44.1.1
2wczA	139	3.31e+01
3bp5A	117	3.32e+01		b.1.1.1
3fucA	284	3.39e+01
1opjA	293	3.43e+01		d.144.1.7
1npuA	117	3.44e+01		b.1.1.1
2i79A	172	3.46e+01
1s9rA	410	3.47e+01		d.126.1.4
1gycA	499	3.48e+01		b.6.1.3
				b.6.1.3
				b.6.1.3
1rdqE	350	3.50e+01		d.144.1.7
1ckiA	317	3.52e+01	1csn	d.144.1.7
2ce2X	166	3.57e+01
3bp6A	117	3.57e+01
3cgxA	242	3.57e+01
1lxyA	409	3.59e+01		d.126.1.4

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1urjA	1136	3.60e+01		e.58.1.1
1k20A	310	3.64e+01		c.107.1.1
2i5qA	415	3.67e+01
1ds1A	324	3.68e+01	1drtA	b.82.2.2
2czrA	226	3.81e+01		c.52.4.1
1l0wA	580	3.81e+01		b.40.4.1
				d.74.4.1
				d.104.1.1
2dykA	161	3.82e+01
1vetB	125	3.82e+01		d.110.7.1
2q9oA	559	3.87e+01		b.6.1.3
				b.6.1.3
				b.6.1.3
2z84A	218	3.91e+01
2mbrA	340	3.91e+01		d.145.1.2
				d.146.1.1
3grnA	153	3.92e+01
3lo5A	166	3.97e+01
1fzqA	181	3.97e+01	1hurA	c.37.1.8
3a57A	165	3.99e+01

Please cite the following papers:

Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001
Karplus, K. and Karchin, R. and Draper, J. and Casper, J. and Mandel-Gutfreund, Y. and Diekhans, M. and Hughey, R. ``Combining local-structure, fold-recognition, and new-fold methods for protein structure prediction'' Proteins: Structure Function and Genetics53(S6):491-496,15 Oct 2003
Rachel Karchin, Melissa Cline, Yael Mandel-Gutfreund, and Kevin Karplus. ``Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.'' Proteins: Structure, Function, and Genetics, 51(4):504--514, June 2003.