Best Alignments for T0547

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2o0tA	8.3351e-44	2o0tA/T0547-2o0tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qghA	7.4187e-40	2qghA/T0547-2qghA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1twiA	1.9146e-39	1twiA/T0547-1twiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.3 c.1.6.1
2pljA	1.4967e-38	2pljA/T0547-2pljA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p3eA	4.0016e-38	2p3eA/T0547-2p3eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j66A	4.4593e-38	2j66A/T0547-2j66A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1knwA	5.5147e-38	1knwA/T0547-1knwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.3 c.1.6.1
2yxxA	9.7674e-37	2yxxA/T0547-2yxxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nvaA	1.5902e-34	2nvaA/T0547-2nvaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
7odcA	6.8903e-34	7odcA/T0547-7odcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.3 c.1.6.1
1tufA	3.3535e-23	1tufA/T0547-1tufA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.3 c.1.6.1
3gwqA	1.1570e-21	3gwqA/T0547-3gwqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dy3A	1.4516e-20	2dy3A/T0547-2dy3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rcqA	4.9753e-20	1rcqA/T0547-1rcqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.2 c.1.6.1
1xfcA	7.7389e-20	1xfcA/T0547-1xfcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3llxA	4.1364e-19	3llxA/T0547-3llxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bd0A	9.0882e-19	1bd0A/T0547-1bd0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.2 c.1.6.1
2vd8A	2.3383e-18	2vd8A/T0547-2vd8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vfsA	6.4616e-18	1vfsA/T0547-1vfsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.2 c.1.6.1
3co8A	2.2300e-16	3co8A/T0547-3co8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001