Best Alignments for T0547

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2o0tA	1.6362e-38	2o0tA/T0547-2o0tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qghA	4.2432e-37	2qghA/T0547-2qghA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1twiA	4.2409e-36	1twiA/T0547-1twiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.3 c.1.6.1
2pljA	4.8495e-36	2pljA/T0547-2pljA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1knwA	2.3079e-34	1knwA/T0547-1knwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.3 c.1.6.1
2yxxA	3.6836e-34	2yxxA/T0547-2yxxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p3eA	1.7939e-33	2p3eA/T0547-2p3eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j66A	1.9187e-33	2j66A/T0547-2j66A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nvaA	1.0338e-32	2nvaA/T0547-2nvaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
7odcA	1.1654e-31	7odcA/T0547-7odcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.3 c.1.6.1
3gwqA	1.1436e-24	3gwqA/T0547-3gwqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3llxA	7.7597e-24	3llxA/T0547-3llxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rcqA	2.5401e-22	1rcqA/T0547-1rcqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.2 c.1.6.1
2dy3A	3.3630e-22	2dy3A/T0547-2dy3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bd0A	4.4180e-22	1bd0A/T0547-1bd0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.2 c.1.6.1
3hurA	6.8644e-22	3hurA/T0547-3hurA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3kw3A	1.2838e-21	3kw3A/T0547-3kw3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xfcA	1.7104e-21	1xfcA/T0547-1xfcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vfsA	7.2129e-21	1vfsA/T0547-1vfsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.2 c.1.6.1
2vd8A	6.6935e-20	2vd8A/T0547-2vd8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001