Best Alignments for T0547

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2o0tA	4.2549e-46	2o0tA/T0547-2o0tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qghA	3.7077e-43	2qghA/T0547-2qghA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1twiA	2.5437e-40	1twiA/T0547-1twiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.3 c.1.6.1
1tufA	3.6917e-40	1tufA/T0547-1tufA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.3 c.1.6.1
2j66A	1.9425e-39	2j66A/T0547-2j66A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1knwA	6.6327e-39	1knwA/T0547-1knwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.3 c.1.6.1
2p3eA	4.1954e-38	2p3eA/T0547-2p3eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pljA	5.9521e-37	2pljA/T0547-2pljA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yxxA	1.8190e-36	2yxxA/T0547-2yxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nvaA	2.7237e-34	2nvaA/T0547-2nvaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
7odcA	4.0217e-34	7odcA/T0547-7odcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.3 c.1.6.1
2dy3A	4.3448e-27	2dy3A/T0547-2dy3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rcqA	1.7986e-26	1rcqA/T0547-1rcqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.2 c.1.6.1
3gwqA	4.0911e-26	3gwqA/T0547-3gwqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xfcA	7.4670e-25	1xfcA/T0547-1xfcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vd8A	1.5150e-24	2vd8A/T0547-2vd8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bd0A	7.1022e-22	1bd0A/T0547-1bd0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.2 c.1.6.1
3co8A	8.6832e-21	3co8A/T0547-3co8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vfsA	4.7558e-20	1vfsA/T0547-1vfsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.2.2 c.1.6.1
3llxA	1.0975e-18	3llxA/T0547-3llxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001