#  SAM: hmmscore
#  (c) 1992-2001 Regents of the University of California, Santa Cruz
#
#          Sequence Alignment and Modeling Software System
#         http://www.cse.ucsc.edu/research/compbio/sam.html
#
# ----------------- Citations (SAM, SAM-T2K, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, et al., What is the value added by human intervention in protein
#  structure prediction, Proteins: Stucture, Function, Genetics 45(S5):86--91, 2001.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
# ---------------------------------------------------------------------
# version: SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.5 (July 15, 2005) compiled 06/01/06_09:03:53
# runname: T0547.template-lib
# date: Wed May 19 09:04:14 2010
# user: farmer
# host: bmecluster-0-6.local
# lambda: 1.000
# tau 1.000
#