Best Alignments for T0545

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mugA/T0545-1mugA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mugA/T0545-1mugA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1666e-192.41e-55 1mugA c.18.1.2
2c2pA/T0545-2c2pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c2pA/T0545-2c2pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0215e-166.70e-51
2c2qA/T0545-2c2qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c2qA/T0545-2c2qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8583e-164.40e-50
2rbaA/T0545-2rbaA-t2k-global-adpstyle1.a2m 2rbaA/T0545-2rbaA-t2k-global-adpstyle1.al 1.7151e-061.50e-40
2d3yA/T0545-2d3yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d3yA/T0545-2d3yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1526e-034.98e-24
3ikbA/T0545-3ikbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ikbA/T0545-3ikbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4388e-022.19e-20
1oe4A/T0545-1oe4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oe4A/T0545-1oe4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7394e-022.93e-18 c.18.1.3
1bx1A/T0545-1bx1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bx1A/T0545-1bx1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4229e+001.95e-17 1fnc b.43.4.2
c.25.1.1
2owrA/T0545-2owrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2owrA/T0545-2owrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4258e+008.27e-15
1jl3A/T0545-1jl3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jl3A/T0545-1jl3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5842e+001.09e-15 c.44.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001