Best Alignments for T0545

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mugA/T0545-1mugA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mugA/T0545-1mugA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7031e-209.81e-67 1mugA c.18.1.2
2c2pA/T0545-2c2pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c2pA/T0545-2c2pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0909e-163.00e-56
2c2qA/T0545-2c2qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c2qA/T0545-2c2qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1691e-165.90e-56
3ikbA/T0545-3ikbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ikbA/T0545-3ikbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7242e-117.92e-44
2rbaA/T0545-2rbaA-t04-global-adpstyle1.a2m 2rbaA/T0545-2rbaA-t04-global-adpstyle1.al 1.1562e-108.73e-39
2d3yA/T0545-2d3yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d3yA/T0545-2d3yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6260e-093.82e-36
1oe4A/T0545-1oe4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oe4A/T0545-1oe4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9278e-031.80e-23 c.18.1.3
4eugA/T0545-4eugA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 4eugA/T0545-4eugA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0123e-016.01e-20 3eugA c.18.1.1
3h4tA/T0545-3h4tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3h4tA/T0545-3h4tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3042e-018.08e-18
2jhqA/T0545-2jhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2jhqA/T0545-2jhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7066e-017.32e-17

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001