# List of template models which gave the target the best scores. # HMM and HMM E-value scores computed by SAM (c) 1992-2001 Regents of the University of California, Santa Cruz # Sequence Alignment and Modeling Software System # http://www.soe.ucsc.edu/research/compbio/sam.html # ----------------- Citations (SAM, SAM-T99, HMMs) -------------------- # R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: # Extension and analysis of the basic method, CABIOS 12:95-107, 1996. # K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting # remote protein homologies, Bioinformatics 14(10):846-856, 1998. # A. Krogh et al., Hidden Markov models in computational biology: # Applications to protein modeling, JMB 235:1501-1531, Feb 1994. # # FSSP representative for each protein chain taken from FSSP: # ------------------Citations (FSSP) ----------------------------------- # L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602. # #SCOP domains found in each protein chain taken from SCOP: # ------------------Citations (SCOP) ----------------------------------- #Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995). #SCOP: a structural classification of proteins database for the investigation of sequences and structures. #J. Mol. Biol. 247, 536-540. Template_ID Template_Length Template_Evalue FSSP-rep SCOP_domain SCOP_suid 5S 5N 12S 6S 12S 10N 2kl6A 109 9.209e-16 3iduA 117 3.691e-14 2kutA 123 2.558e-10 3fymA 83 1.216e+00 1mhxA 66 4.503e+00 d.15.7.1 79134 3kfoA 214 1.083e+01 3gqqA 168 2.457e+01 2wmfA 556 2.910e+01 2pc1A 174 2.918e+01 1pgx 71 3.022e+01 2igd 1htn 157 3.036e+01 1htn 1ibxB 90 3.198e+01 1c9fA d.15.2.1 62232 1f2rI 101 3.307e+01 1c9fA d.15.2.1 37641 1c9fA 88 3.490e+01 1c9fA d.15.2.1 37639 2zw0A 58 3.565e+01 3filA 57 3.700e+01