Best Alignments for T0532

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3ihvA/T0532-3ihvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ihvA/T0532-3ihvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0211e-342.66e-141
3i4gA/T0532-3i4gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3i4gA/T0532-3i4gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3846e-343.53e-143
3kezA/T0532-3kezA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3kezA/T0532-3kezA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0045e-344.01e-144
3cghA/T0532-3cghA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cghA/T0532-3cghA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0221e-332.08e-134 a.118.8.6
3gzsA/T0532-3gzsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3gzsA/T0532-3gzsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1953e-329.14e-120
3jysA/T0532-3jysA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3jysA/T0532-3jysA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2668e-321.25e-128
3jq1A/T0532-3jq1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3jq1A/T0532-3jq1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5149e-321.16e-143
3hdxA/T0532-3hdxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3hdxA/T0532-3hdxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9762e-302.24e-123
3ehmA/T0532-3ehmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ehmA/T0532-3ehmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.5358e-292.19e-114
3jq0A/T0532-3jq0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3jq0A/T0532-3jq0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1725e-277.86e-117

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001