Best Alignments for T0529

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3crvA/T0529-3crvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3crvA/T0529-3crvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0070e+009.63e-15
2pt7A/T0529-2pt7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pt7A/T0529-2pt7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0110e+002.36e-22 c.37.1.11
3kk1A/T0529-3kk1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3kk1A/T0529-3kk1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6600e+005.90e-24
3e2qA/T0529-3e2qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3e2qA/T0529-3e2qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0310e+002.02e-25
2nwrA/T0529-2nwrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nwrA/T0529-2nwrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6169e+006.67e-17
1pe1A/T0529-1pe1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pe1A/T0529-1pe1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6725e+001.41e-16 c.1.10.4
1zhaA/T0529-1zhaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zhaA/T0529-1zhaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6845e+002.59e-16
2wadA/T0529-2wadA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2wadA/T0529-2wadA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0096e+015.01e-20
1j7nA/T0529-1j7nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j7nA/T0529-1j7nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1107e+013.91e-23 d.92.1.14
d.92.1.14
d.166.1.1
1vlwA/T0529-1vlwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vlwA/T0529-1vlwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1254e+013.54e-17 c.1.10.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001