Best Alignments for T0529

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vlwA/T0529-1vlwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vlwA/T0529-1vlwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7024e+003.54e-17 c.1.10.1
1e8gA/T0529-1e8gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e8gA/T0529-1e8gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0909e+012.95e-23 1qltA d.58.32.1
d.145.1.1
3bzcA/T0529-3bzcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bzcA/T0529-3bzcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1305e+011.76e-15 a.60.2.6
a.60.2.6
a.294.1.1
b.40.4.5
c.55.3.13
2wadA/T0529-2wadA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2wadA/T0529-2wadA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1588e+015.01e-20
3kk1A/T0529-3kk1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3kk1A/T0529-3kk1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2106e+011.70e-22
3crxA/T0529-3crxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3crxA/T0529-3crxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2261e+014.36e-22 4crxA a.60.9.1
d.163.1.1
3dagA/T0529-3dagA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3dagA/T0529-3dagA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3167e+011.98e-11
2v82A/T0529-2v82A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2v82A/T0529-2v82A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3532e+014.30e-19
3isnD/T0529-3isnD-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3isnD/T0529-3isnD-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3583e+012.02e-22
2ivyA/T0529-2ivyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ivyA/T0529-2ivyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3677e+011.32e-08 d.58.58.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001