Best Alignments for T0529

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2pt7A/T0529-2pt7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pt7A/T0529-2pt7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4249e+002.36e-22 c.37.1.11
3crvA/T0529-3crvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3crvA/T0529-3crvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2121e+009.63e-15
2nwrA/T0529-2nwrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nwrA/T0529-2nwrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2304e+006.67e-17
1zhaA/T0529-1zhaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zhaA/T0529-1zhaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2520e+002.59e-16
1pe1A/T0529-1pe1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pe1A/T0529-1pe1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6083e+001.41e-16 c.1.10.4
3e2qA/T0529-3e2qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3e2qA/T0529-3e2qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8552e+002.02e-25
3kk1A/T0529-3kk1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3kk1A/T0529-3kk1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7963e+005.90e-24
4crxA/T0529-4crxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 4crxA/T0529-4crxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2780e+003.00e-21 4crxA a.60.9.1
d.163.1.1
3e0iA/T0529-3e0iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3e0iA/T0529-3e0iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6611e+007.37e-16
2f6hX/T0529-2f6hX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6hX/T0529-2f6hX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6904e+007.25e-14

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001