Best Alignments for T0528

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3h5lA	2.2363e-40	3h5lA/T0528-3h5lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3i45A	2.1753e-39	3i45A/T0528-3i45A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1peaA	4.0464e-37	1peaA/T0528-1peaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
3hutA	4.2060e-37	3hutA/T0528-3hutA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1usgA	7.1752e-37	1usgA/T0528-1usgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
3i09A	8.4505e-37	3i09A/T0528-3i09A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3eafA	3.1025e-34	3eafA/T0528-3eafA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3lopA	1.5170e-33	3lopA/T0528-3lopA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pea	4.5190e-32	1pea/T0528-1pea-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2liv	5.1547e-30	2liv/T0528-2liv-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3lmkA	5.4563e-30	3lmkA/T0528-3lmkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3lkbA	9.9430e-30	3lkbA/T0528-3lkbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z15A	2.3984e-28	1z15A/T0528-1z15A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ks9A	8.1686e-26	3ks9A/T0528-3ks9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ewkA	6.4334e-24	1ewkA/T0528-1ewkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1jdpA	6.7661e-19	1jdpA/T0528-1jdpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1dp4A	2.6465e-16	1dp4A/T0528-1dp4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
3h6gA	2.8084e-16	3h6gA/T0528-3h6gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3h5vA	2.8112e-15	3h5vA/T0528-3h5vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2wjwA	3.3373e-15	2wjwA/T0528-2wjwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001