Best Alignments for T0528

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3i09A	1.3388e-37	3i09A/T0528-3i09A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3lopA	8.1361e-36	3lopA/T0528-3lopA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hutA	1.3229e-35	3hutA/T0528-3hutA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3lmkA	1.2623e-34	3lmkA/T0528-3lmkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3i45A	1.3412e-34	3i45A/T0528-3i45A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pea	1.9910e-34	1pea/T0528-1pea-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3eafA	1.9652e-33	3eafA/T0528-3eafA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1usgA	3.4368e-33	1usgA/T0528-1usgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1z15A	4.8535e-33	1z15A/T0528-1z15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1peaA	5.5222e-33	1peaA/T0528-1peaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
3lkbA	3.0207e-32	3lkbA/T0528-3lkbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3h5vA	3.0317e-32	3h5vA/T0528-3h5vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dp4A	3.7149e-32	1dp4A/T0528-1dp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1ewkA	1.4151e-31	1ewkA/T0528-1ewkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
3ks9A	1.6928e-31	3ks9A/T0528-3ks9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3h6gA	2.8229e-31	3h6gA/T0528-3h6gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3h5lA	4.1382e-31	3h5lA/T0528-3h5lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jdpA	2.0145e-29	1jdpA/T0528-1jdpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2wjwA	2.4041e-29	2wjwA/T0528-2wjwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3jpwA	5.1709e-29	3jpwA/T0528-3jpwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001