Best Alignments for T0528

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3i09A/T0528-3i09A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3i09A/T0528-3i09A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8692e-446.87e-217
3i45A/T0528-3i45A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3i45A/T0528-3i45A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1434e-413.39e-206
3hutA/T0528-3hutA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3hutA/T0528-3hutA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3930e-402.75e-208
1usgA/T0528-1usgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1usgA/T0528-1usgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6982e-401.99e-188 c.93.1.1
1z15A/T0528-1z15A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z15A/T0528-1z15A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6613e-374.95e-184
3lopA/T0528-3lopA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3lopA/T0528-3lopA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4195e-321.97e-164
3h5lA/T0528-3h5lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3h5lA/T0528-3h5lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9254e-312.30e-143
3lkbA/T0528-3lkbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3lkbA/T0528-3lkbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2261e-291.01e-156
3eafA/T0528-3eafA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3eafA/T0528-3eafA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6295e-283.47e-143
3lmkA/T0528-3lmkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3lmkA/T0528-3lmkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7176e-242.51e-129

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001