# List of top-scoring protein chains for T0523.t06-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3lyxA	124	1.54e-13		
3ewkA	227	5.57e-13		
2gj3A	120	1.19e-12		
2pr5A	132	5.38e-10		
2v0uA	146	5.71e-10		
3luqA	114	5.87e-10		
2v1bA	144	1.24e-09		
1lswA	131	1.28e-09	d.110.3.2	78181
1y28A	131	1.29e-09	d.110.3.2	116399
1n9lA	109	1.68e-09	d.110.3.6	85468
2cmnA	130	2.05e-09		
2z6dA	130	3.09e-09		
3bwlA	126	7.41e-09		
1ew0A	130	9.96e-09	d.110.3.2	40905
2wkpA	332	1.36e-08		
1s67L	119	1.86e-08	d.110.3.2	105303
2r78A	117	1.95e-08		
2wkrA	332	2.18e-08		
2vv6A	119	2.35e-08		
2z6cA	129	2.39e-08		
2wkqA	332	2.88e-08		
3eehA	125	2.96e-08		
1v9yA	167	3.93e-08	d.110.3.2	108454
1bywA	110	9.79e-08	d.110.3.6	40912
1xj3A	116	1.38e-07	d.110.3.2	122026
3f1pA	117	5.98e-07		
1jnuA	104	6.18e-07	d.110.3.6	71762
2b02A	119	6.70e-07		
1p97A	114	7.26e-07	d.110.3.7	94382
1x0oA	119	7.46e-07		
2a24A	107	7.67e-07		
2a24B	108	8.63e-07		
3f1pB	121	1.06e-06		
3a0rA	349	1.94e-06		
2k7sA	119	3.00e-06		
3h9wA	115	7.61e-06		
3is2A	154	9.75e-06		
2pd8A	149	1.01e-05		
2pdrA	149	1.03e-05		
3hjkA	154	1.05e-05		
3d72A	149	1.36e-05		
3hjiA	154	1.60e-05		
3icyA	118	3.67e-05		
3fc7A	125	3.95e-05		
3a0sA	96	6.24e-05		
3a0vA	96	7.90e-05		
3b33A	115	0.000370		
2w0nA	118	0.000471		
1ll8A	114	0.000887	d.110.3.5	78089
3fg8A	118	0.001135		
1wa9A	368	0.003536		
3gecA	312	0.003708		
3caxA	369	0.005186		
1otdA	125	0.01424	d.110.3.1	93513
2vlgA	111	0.01610		
2jheA	190	0.02306		
2qkpA	151	0.02339		
3gdiA	309	0.04152		
1gsvA	125	0.07072	d.110.3.1	65537
1odvA	100	0.07480	d.110.3.1	86887
1ot6A	125	0.08347	d.110.3.1	93504
1f9iA	125	0.08420	d.110.3.1	40898
2i9vA	125	0.1014		
1d7eA	122	0.1189	d.110.3.1	40900
1nwzA	125	0.1217	d.110.3.1	86370
1xfnA	113	0.1508	d.110.3.1	121934
2d02A	125	0.1774		
1f98A	125	0.2451	d.110.3.1	40899
1gsxA	125	0.2985	d.110.3.1	65539
1gswA	125	0.5687	d.110.3.1	65538
1sujA	392	6.506		
2veaA	520	17.67	d.110.2.1,d.110.2.4,d.110.3.9	153022,153023,153024
2q18X	293	19.17		
1wfoA	130	21.46	b.1.2.1	120970
2w1rA	123	25.37		
1mzuA	129	26.93	d.110.3.1	79714
2zyhA	475	27.23		
2zyrA	484	27.87		
2zysA	479	27.93		
2zyiA	475	27.97		
2yweA	600	28.38		
1wfxA	186	39.52	d.166.1.5	114596
1p0zA	131	45.93	d.110.6.1	93882
2v9aA	133	47.93	d.110.6.1	152803
2j80A	135	48.97	d.110.6.1	147906
2oolA	337	51.50	d.110.2.1,d.110.3.9	148932,148933
1oj5A	132	59.46	d.110.3.8	93087
1mkmA	249	60.09	a.4.5.33,d.110.2.2	79242,79243
3lk7A	451	61.03		
2rliA	171	67.20		
2ielA	138	73.74	c.26.2.4	147649
2e70A	71	86.54