Best Alignments for T0520

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2w01A/T0520-2w01A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2w01A/T0520-2w01A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2512e-284.15e-102
2wz1A/T0520-2wz1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2wz1A/T0520-2wz1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1756e-261.10e-93
1wc1A/T0520-1wc1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wc1A/T0520-1wc1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6949e-258.47e-94 d.58.29.1
1ybtA/T0520-1ybtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ybtA/T0520-1ybtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1387e-224.16e-85
1y10A/T0520-1y10A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y10A/T0520-1y10A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0469e-227.76e-74
3et6A/T0520-3et6A-t2k-global-adpstyle1.a2m 3et6A/T0520-3et6A-t2k-global-adpstyle1.al 5.1220e-112.41e-50
1yk9A/T0520-1yk9A-t2k-global-adpstyle1.a2m 1yk9A/T0520-1yk9A-t2k-global-adpstyle1.al 9.3716e-112.41e-50
2qv6A/T0520-2qv6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qv6A/T0520-2qv6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2513e-038.88e-21
3iclA/T0520-3iclA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3iclA/T0520-3iclA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1695e-023.29e-19
3i5aA/T0520-3i5aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3i5aA/T0520-3i5aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7061e-021.07e-17

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001