Best Alignments for T0520

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1culA/T0520-1culA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1culA/T0520-1culA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8400e-286.16e-82 1azsA d.58.29.1
2w01A/T0520-2w01A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2w01A/T0520-2w01A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8788e-269.20e-90
2wz1A/T0520-2wz1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2wz1A/T0520-2wz1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7945e-243.88e-85
1ybtA/T0520-1ybtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ybtA/T0520-1ybtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3778e-211.54e-78
1y10A/T0520-1y10A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y10A/T0520-1y10A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1639e-202.87e-72
3et6A/T0520-3et6A-t04-global-adpstyle1.a2m 3et6A/T0520-3et6A-t04-global-adpstyle1.al 2.8829e-158.55e-51
1yk9A/T0520-1yk9A-t04-global-adpstyle1.a2m 1yk9A/T0520-1yk9A-t04-global-adpstyle1.al 1.8740e-148.55e-51
2qv6A/T0520-2qv6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qv6A/T0520-2qv6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6603e-036.89e-20
3i5aA/T0520-3i5aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3i5aA/T0520-3i5aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7967e-035.01e-20
3i5bA/T0520-3i5bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3i5bA/T0520-3i5bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5099e-029.29e-19

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001