Best Alignments for T0518

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3h3lA	4.8720e-28	3h3lA/T0518-3h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hbkA	1.9914e-25	3hbkA/T0518-3hbkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3immA	2.3658e-21	3immA/T0518-3immA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dypA	4.7456e-11	1dypA/T0518-1dypA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
2hykA	6.4883e-11	2hykA/T0518-2hykA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vy0A	2.0645e-10	2vy0A/T0518-2vy0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ayhA	2.1951e-10	2ayhA/T0518-2ayhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
2ayh	2.8100e-10	2ayh/T0518-2ayh-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gbgA	5.9995e-10	1gbgA/T0518-1gbgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
3juuA	9.8050e-10	3juuA/T0518-3juuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1upsA	1.1270e-09	1upsA/T0518-1upsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2 b.42.2.3
1gbg	1.2069e-09	1gbg/T0518-1gbg-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3dgtA	1.3381e-09	3dgtA/T0518-3dgtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1o4yA	6.7007e-09	1o4yA/T0518-1o4yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
2uwaA	7.9971e-09	2uwaA/T0518-2uwaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ilfA	8.5465e-09	3ilfA/T0518-3ilfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2w39A	4.7968e-08	2w39A/T0518-2w39A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cl2A	8.0323e-08	2cl2A/T0518-2cl2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1umzA	1.1629e-07	1umzA/T0518-1umzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
1cpnA	1.6563e-07	1cpnA/T0518-1cpnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001