Best Alignments for T0518

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template Template E-value A2M alignment SCOP Domain(s)
3hbkA 3.4606e-32 3hbkA/T0518-3hbkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3h3lA 2.9345e-31 3h3lA/T0518-3h3lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3immA 1.2653e-25 3immA/T0518-3immA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gbg 2.0645e-03 1gbg/T0518-1gbg-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dypA 1.1602e-02 1dypA/T0518-1dypA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.2
2ayh 1.6346e-02 2ayh/T0518-2ayh-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hykA 2.3613e-02 2hykA/T0518-2hykA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gbgA 6.0845e-02 1gbgA/T0518-1gbgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.2
1upsA 8.3884e-02 1upsA/T0518-1upsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.2
b.42.2.3
2ayhA 1.4321e-01 2ayhA/T0518-2ayhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.2
1uaiA 1.5742e-01 1uaiA/T0518-1uaiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.18
3gneA 1.7940e-01 3gneA/T0518-3gneA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2v73A 1.9767e-01 2v73A/T0518-2v73A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uwaA 2.0479e-01 2uwaA/T0518-2uwaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3juuA 2.3427e-01 3juuA/T0518-3juuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hr9A 2.4994e-01 3hr9A/T0518-3hr9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vy0A 2.5547e-01 2vy0A/T0518-2vy0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1umzA 6.6154e-01 1umzA/T0518-1umzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.2
3ilfA 6.7402e-01 3ilfA/T0518-3ilfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a8d 9.4739e-01 1a8d/T0518-1a8d-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001