Best Alignments for T0518

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template Template E-value A2M alignment SCOP Domain(s)
3h3lA 8.8299e-26 3h3lA/T0518-3h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hbkA 2.0340e-22 3hbkA/T0518-3hbkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3immA 4.2678e-20 3immA/T0518-3immA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dypA 3.4759e-13 1dypA/T0518-1dypA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.2
2vy0A 6.9898e-13 2vy0A/T0518-2vy0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ayh 9.4440e-13 2ayh/T0518-2ayh-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3dgtA 1.4161e-12 3dgtA/T0518-3dgtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hykA 1.4487e-12 2hykA/T0518-2hykA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ayhA 1.6711e-12 2ayhA/T0518-2ayhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.2
3juuA 5.1082e-12 3juuA/T0518-3juuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gbgA 5.1920e-12 1gbgA/T0518-1gbgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.2
1o4yA 9.2176e-12 1o4yA/T0518-1o4yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.2
1gbg 1.2597e-11 1gbg/T0518-1gbg-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1upsA 1.3662e-11 1upsA/T0518-1upsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.2
b.42.2.3
3ilfA 3.5253e-11 3ilfA/T0518-3ilfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uwaA 1.0586e-10 2uwaA/T0518-2uwaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2w39A 7.6775e-10 2w39A/T0518-2w39A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hr9A 4.0601e-09 3hr9A/T0518-3hr9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1umzA 5.8576e-09 1umzA/T0518-1umzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m b.29.1.2
2cl2A 8.5846e-09 2cl2A/T0518-2cl2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001