Best Alignments for T0518

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3h3lA	1.4936e-29	3h3lA/T0518-3h3lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hbkA	5.5369e-26	3hbkA/T0518-3hbkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3immA	9.9927e-21	3immA/T0518-3immA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hykA	1.7641e-13	2hykA/T0518-2hykA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dypA	8.8257e-13	1dypA/T0518-1dypA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
2ayhA	2.1544e-12	2ayhA/T0518-2ayhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
2vy0A	4.7302e-12	2vy0A/T0518-2vy0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gbgA	1.4588e-11	1gbgA/T0518-1gbgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
1upsA	1.9755e-11	1upsA/T0518-1upsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2 b.42.2.3
2cl2A	2.9623e-11	2cl2A/T0518-2cl2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3juuA	3.0959e-11	3juuA/T0518-3juuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ayh	3.9744e-11	2ayh/T0518-2ayh-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3dgtA	7.5548e-11	3dgtA/T0518-3dgtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2w39A	1.4979e-10	2w39A/T0518-2w39A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uwaA	2.3070e-10	2uwaA/T0518-2uwaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gbg	2.4736e-10	1gbg/T0518-1gbg-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ilfA	7.4041e-10	3ilfA/T0518-3ilfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1o4yA	7.9511e-10	1o4yA/T0518-1o4yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
1cpnA	8.3394e-10	1cpnA/T0518-1cpnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2
1umzA	1.0803e-09	1umzA/T0518-1umzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001