Best Alignments for T0517

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2qs7A/T0517-2qs7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qs7A/T0517-2qs7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.5124e-222.59e-71
1jx7A/T0517-1jx7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jx7A/T0517-1jx7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5898e-088.58e-33 c.114.1.1
2pd2A/T0517-2pd2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pd2A/T0517-2pd2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8111e-084.17e-39
2fb6A/T0517-2fb6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fb6A/T0517-2fb6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6288e-041.04e-22
2hy5C/T0517-2hy5C-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hy5C/T0517-2hy5C-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5509e-039.30e-21 c.114.1.2
1zxxA/T0517-1zxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zxxA/T0517-1zxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8531e-024.44e-26
6pfkA/T0517-6pfkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 6pfkA/T0517-6pfkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0506e-012.36e-24 3pfk c.89.1.1
3h7eA/T0517-3h7eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3h7eA/T0517-3h7eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1141e-014.12e-23
1irxA/T0517-1irxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1irxA/T0517-1irxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2209e-019.77e-20 a.97.1.2
c.26.1.1
1g5tA/T0517-1g5tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g5tA/T0517-1g5tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6891e-012.98e-16 1g5rA c.37.1.11

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001