Best Alignments for T0517

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2qs7A/T0517-2qs7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qs7A/T0517-2qs7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1766e-212.59e-71
2pd2A/T0517-2pd2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pd2A/T0517-2pd2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4352e-077.93e-35
1l1sA/T0517-1l1sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l1sA/T0517-1l1sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1450e-078.84e-29 c.114.1.1
2fb6A/T0517-2fb6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fb6A/T0517-2fb6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6624e-031.19e-22
1zxxA/T0517-1zxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zxxA/T0517-1zxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7405e-024.44e-26
2hy5C/T0517-2hy5C-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hy5C/T0517-2hy5C-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2060e-021.19e-14 c.114.1.2
6pfkA/T0517-6pfkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 6pfkA/T0517-6pfkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4078e-022.36e-24 3pfk c.89.1.1
1g5tA/T0517-1g5tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g5tA/T0517-1g5tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4282e-012.98e-16 1g5rA c.37.1.11
1f0kA/T0517-1f0kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f0kA/T0517-1f0kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4435e-011.26e-17 1f0kA c.87.1.2
1ebdA/T0517-1ebdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ebdA/T0517-1ebdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1380e-014.06e-15 1lvl c.3.1.5
c.3.1.5
d.87.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001