Best Alignments for T0517

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2qs7A/T0517-2qs7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qs7A/T0517-2qs7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1718e-221.15e-67
1jx7A/T0517-1jx7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jx7A/T0517-1jx7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7672e-098.58e-33 c.114.1.1
2pd2A/T0517-2pd2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pd2A/T0517-2pd2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6070e-084.17e-39
2fb6A/T0517-2fb6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fb6A/T0517-2fb6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7777e-041.04e-22
2hy5C/T0517-2hy5C-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hy5C/T0517-2hy5C-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8064e-049.30e-21 c.114.1.2
3h7eA/T0517-3h7eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3h7eA/T0517-3h7eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7148e-022.35e-21
1irxA/T0517-1irxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1irxA/T0517-1irxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1334e-019.77e-20 a.97.1.2
c.26.1.1
1zxxA/T0517-1zxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zxxA/T0517-1zxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3910e-014.21e-18
2zdsA/T0517-2zdsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2zdsA/T0517-2zdsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4830e-011.08e-16
2hi0A/T0517-2hi0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hi0A/T0517-2hi0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4966e-012.55e-17

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001