(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • TR476 PfG1, Pyrococcus furiosus, 108 residues
                 10        20        30        40        50        60  
                 |         |         |         |         |         |  
   1 ...AKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGKTLPRRE
   2 m..AKCPVCGASLDWRDLIEQMLTLENAEDIFKDREEFLGKLKEFTFKCPVCGEEFLGKYLPMDE
   3 lgmAKCPVCGASLDWRDLIEQMLTLENAEDIFKDREEFLGKLKEFTFKCPVCGEEFLGKYLPMDE
   4 m..AKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGKTLPRRE
   5 m..ARCPLCGKALDWAELINQMLEKGVGEDVFKDRDKFMETFNDFVFKCPHCGEEFYGRNLPASE
   6 lgmAKCPVCGSTLDWRELIEQMLSMENAREVFSDKERFLKELEEFTFKCPVCGEEFLGKYLPREE


            70        80          
            |         |          
   1 AEKVFELLNDFKGGIDWENKRVKLK...
   2 AEKVFELLNDFKGSIDWDNRKVRIRlnq
   3 AEKVFELLNDFKGSIDWDNRKVRIRlnq
   4 AEKVFELLNDFKGGIDWENKRVKLKlnd
   5 TEKVFELLNDFKGSIDWDNKRVRLRlns
   6 GEKVFELLNDFKGSIDWERRKVRIRlnq