This file specifies which residues will be varied Column 2: Chain Column 4-7: sequential residue number Column 9-12: pdb residue number Column 14-18: id (described below) Column 21-40: amino acids to be used NATAA => use native amino acid ALLAA => all amino acids NATRO => native amino acid and rotamer PIKAA => select inividual amino acids POLAR => polar amino acids APOLA => apolar amino acids The following demo lines are in the proper format A 1 3 NATAA A 2 4 ALLAA A 3 6 NATRO A 4 7 NATAA B 5 1 PIKAA DFLM B 6 2 PIKAA HIL B 7 3 POLAR ------------------------------------------------- start A 1 2 NATAA A A 2 3 NATAA K A 3 4 NATRO C A 4 5 NATRO P A 5 6 NATAA I A 6 7 NATRO C A 7 8 NATAA G A 8 9 NATAA S A 9 10 NATRO P A 10 11 NATAA L A 11 12 NATAA K A 12 13 NATAA W A 13 14 NATAA E A 14 15 NATAA E A 15 16 NATAA L A 16 17 NATAA I A 17 18 NATAA E A 18 19 NATAA E A 19 20 NATAA M A 20 21 NATAA L A 21 22 NATAA I A 22 23 NATAA I A 23 24 NATAA E A 24 25 NATAA N A 25 26 NATAA F A 26 27 NATAA E A 27 28 NATAA E A 28 29 NATAA I A 29 30 NATAA V A 30 31 NATAA K A 31 32 NATAA D A 32 33 NATAA R A 33 34 NATAA E A 34 35 NATAA R A 35 36 NATAA F A 36 37 NATAA L A 37 38 NATAA A A 38 39 NATAA Q A 39 40 NATAA V A 40 41 NATAA E A 41 42 NATAA E A 42 43 NATAA F A 43 44 NATAA V A 44 45 NATAA F A 45 46 NATAA K A 46 47 NATRO C A 47 48 NATRO P A 48 49 NATAA V A 49 50 NATRO C A 50 51 NATAA G A 51 52 NATAA E A 52 53 NATAA E A 53 54 NATAA F A 54 55 NATAA Y A 55 56 NATAA G A 56 57 NATAA K A 57 58 NATAA T A 58 59 NATAA L A 59 60 NATRO P A 60 61 NATAA R A 61 62 NATAA R A 62 63 NATAA E A 63 64 NATAA A A 64 65 NATAA E A 65 66 NATAA K A 66 67 NATAA V A 67 68 NATAA F A 68 69 NATAA E A 69 70 NATAA L A 70 71 NATAA L A 71 72 NATAA N A 72 73 NATAA D A 73 74 NATAA F A 74 75 NATAA K A 75 76 NATAA G A 76 77 NATAA G A 77 78 NATAA I A 78 79 NATAA D A 79 80 NATAA W A 80 81 NATAA E A 81 82 NATAA N A 82 83 NATAA K A 83 84 NATAA R A 84 85 NATAA V A 85 86 NATAA K A 86 87 NATAA L A 87 88 NATAA K