# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2fi0A	81	0.08389	a.248.1.1	133507
1txgA	335	9.242	a.100.1.6,c.2.1.6	112775,112776
1e0gA	48	13.75	d.7.1.1	37325
2qnuA	226	19.28		
2akaA	776	19.56		
1w7jA	795	26.90	b.34.3.1,c.37.1.9	120688,120689
2bkhA	814	28.52		
1w9iA	770	30.37		
1jf8A	131	32.01	c.44.1.1	66621
1cc8A	73	32.64	d.58.17.1	39343
1fe0A	68	32.87	d.58.17.1	39345
2fzpA	144	34.43		
1jl3A	139	38.12	c.44.1.1	66826
2ezkA	99	40.54	a.4.1.2	16027
1yaaA	412	41.73	c.67.1.1	34280
2jucA	59	44.57		
1ksiB	642	45.03	b.30.2.1,d.17.2.1,d.17.2.1	24409,38045,38046
2gwfB	134	45.19		
2ogbA	126	45.59		
1dlwA	116	46.15	a.1.1.1	14982
1x9fA	151	60.13	a.1.1.2	114983
1lvk	762	67.12		
1z67A	135	69.34	a.259.1.1	124507
1d0yA	761	69.70	b.34.3.1,c.37.1.9	24581,32178
2aorA	223	71.27		
2pl2A	217	71.88		
2imfA	203	73.44		
1yzxA	226	82.47		
2ezhA	75	82.66	a.4.1.2	16029
1pczA	191	82.91	d.129.1.1,d.129.1.1	41292,41293
1br2A	791	83.15	b.34.3.1,c.37.1.9	24558,32155
1mvwA	840	83.61	i.15.1.1	79523
2ofyA	86	85.24		
1otgA	125	85.36	d.80.1.2	39831
1o13A	136	87.09	c.55.5.1	80762
1hdsA	141	88.33	a.1.1.2	15378