# List of top-scoring protein chains for t06-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2fi0A	81	0.6727	a.248.1.1	133507
1w9iA	770	8.382		
2v26A	784	17.35		
1w7jA	795	22.99	b.34.3.1,c.37.1.9	120688,120689
1y6uA	70	28.02		
2d5rB	116	28.05		
1gbs	185	28.35		
1u3eM	174	31.05	d.4.1.3,d.285.1.1	107640,107641
2bkhA	814	32.07		
1gbsA	185	40.60	d.2.1.5	36986
2feaA	236	45.56	c.108.1.20	133327
2b5aA	77	51.39	a.35.1.3	127882
1ae7A	119	56.40	a.133.1.2	19553
2gwfB	134	56.98		
2uwxA	494	57.52	e.3.1.1	140002
1qw1A	121	59.92		
1fe0A	68	61.94	d.58.17.1	39345
2qnuA	226	62.57		
1jpyA	137	68.14	g.17.1.6	67065
2nxoA	291	69.06		
1fipA	98	69.33	a.4.1.12	18980
2oap1	511	69.83		
1sur	215	70.83		
1ogiA	303	71.22	b.43.4.2,c.25.1.1	92914,92915
1vk3A	615	72.36	d.79.4.1,d.79.4.1,d.139.1.1,d.139.1.1	100846,100847,100848,100849
1aorA	605	73.16	a.110.1.1,d.152.1.1	19042,41794
2z15A	130	79.90		
2ezhA	75	79.93	a.4.1.2	16029
2v9cA	215	80.52		
2qipA	165	80.54		
2cobA	70	81.20	a.4.1.15	130673
1pq7A	224	82.25	b.47.1.2	95002
2i9uA	439	86.63