# List of top-scoring protein chains for t06-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2fi0A	81	0.8321	a.248.1.1	133507
1w9iA	770	8.839		
2v26A	784	23.52		
2d5rB	116	29.20		
1w7jA	795	29.50	b.34.3.1,c.37.1.9	120688,120689
1y6uA	70	29.58		
1gbs	185	34.07		
1u3eM	174	38.41	d.4.1.3,d.285.1.1	107640,107641
2bkhA	814	41.30		
2gwfB	134	42.87		
1ae7A	119	47.85	a.133.1.2	19553
1gbsA	185	50.41	d.2.1.5	36986
2feaA	236	52.02	c.108.1.20	133327
2qnuA	226	53.51		
1qw1A	121	53.97		
1fe0A	68	54.30	d.58.17.1	39345
1jpyA	137	58.90	g.17.1.6	67065
2b5aA	77	59.03	a.35.1.3	127882
2v9cA	215	59.52		
2nxoA	291	61.88		
1vk3A	615	63.43	d.79.4.1,d.79.4.1,d.139.1.1,d.139.1.1	100846,100847,100848,100849
1sur	215	74.95		
2oap1	511	75.86		
2uwxA	494	78.24	e.3.1.1	140002
1aorA	605	78.78	a.110.1.1,d.152.1.1	19042,41794
2z15A	130	84.51