# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2fi0A	81	0.07066	a.248.1.1	133507
1w9iA	770	3.037		
1w7jA	795	7.951	b.34.3.1,c.37.1.9	120688,120689
2v26A	784	8.085		
2j01U	118	9.134		
2bkhA	814	12.90		
1fe0A	68	14.81	d.58.17.1	39345
1ogiA	303	15.18	b.43.4.2,c.25.1.1	92914,92915
1y6uA	70	19.74		
2oap1	511	21.74		
1u3eM	174	22.59	d.4.1.3,d.285.1.1	107640,107641
2cvhA	220	27.09		
2qnuA	226	27.17		
2qwvA	208	27.84		
2d5rB	116	35.80		
2i1qA	322	37.38	a.60.4.1,c.37.1.11	136984,136985
1jpyA	137	40.68	g.17.1.6	67065
2d2mC	147	42.37		
2bmwA	304	44.87	b.43.4.2,c.25.1.1	128815,128816
1qw1A	121	47.11		
1fipA	98	47.38	a.4.1.12	18980
2al3A	90	58.57	d.15.1.2	126957
2z15A	130	62.95		
2gwfB	134	64.95		
2b5aA	77	67.14	a.35.1.3	127882
2nxoA	291	71.27		
2ghjA	118	72.17		
2dklA	85	72.75	a.5.2.1	131555
1k6kA	143	77.68	a.174.1.1	77274
2amjA	204	79.30		
1cc8A	73	79.55	d.58.17.1	39343
1zupA	315	79.71	c.55.3.11	125681
2vsnA	568	80.70		
2imrA	420	81.73		
1sur	215	85.87		
2gokA	429	88.35