Best Alignments for TR464

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2hf1A	2.2840e-01	2hf1A/TR464-2hf1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j6aA	3.0118e+00	2j6aA/TR464-2j6aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oggA	3.7575e+01	2oggA/TR464-2oggA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cmxA	4.2494e+01	1cmxA/TR464-1cmxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2jwyA	4.7697e+01	2jwyA/TR464-2jwyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tbxA	5.1275e+01	1tbxA/TR464-1tbxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2co5A	5.1484e+01	2co5A/TR464-2co5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pkhA	5.5782e+01	2pkhA/TR464-2pkhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1e1aA	5.6670e+01	1e1aA/TR464-1e1aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.68.6.1
2ctoA	6.0469e+01	2ctoA/TR464-2ctoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v54J	6.1199e+01	1v54J/TR464-1v54J-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.23.4.1
1pjxA	6.2445e+01	1pjxA/TR464-1pjxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.68.6.1
1cqtI	6.2923e+01	1cqtI/TR464-1cqtI-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1g9zA	6.3225e+01	1g9zA/TR464-1g9zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.95.2.1
2occJ	6.4736e+01	2occJ/TR464-2occJ-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.23.4.1
3bqkA	6.5999e+01	3bqkA/TR464-3bqkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ioyA	6.7719e+01	2ioyA/TR464-2ioyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hjiB	6.8046e+01	1hjiB/TR464-1hjiB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1l7dA	6.8411e+01	1l7dA/TR464-1l7dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.4 c.23.12.2
1obfO	7.6318e+01	1obfO/TR464-1obfO-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.3 d.81.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001