# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2j6aA	141	0.6695		
2hf1A	68	2.763		
2oggA	152	13.36		
2ioyA	283	13.58		
1obfO	335	20.10	c.2.1.3,d.81.1.1	86768,86769
1e1aA	314	20.65	b.68.6.1	59155
1pjxA	314	26.22	b.68.6.1	104167
1k3tA	359	27.78	c.2.1.3,d.81.1.1	72022,72023
2jwyA	168	28.14		
1l7dA	384	36.09	c.2.1.4,c.23.12.2	77774,77775
1crwG	333	37.69	c.2.1.3,d.81.1.1	30026,39941
3bu3A	306	49.32		
2o7tA	199	50.03		
2pkhA	148	50.17		
2fn9A	290	50.40		
2occJ	59	52.52	f.23.4.1	43524
1g0u1	266	57.87		
2jepA	395	61.29		
1v54J	59	66.03	f.23.4.1	100331
2o20A	332	67.20		
1w9yA	319	67.24	b.82.2.1	120801
1ypvA	313	67.65		
1edhA	226	68.94	b.1.6.1,b.1.6.1	22198,22199
2pvfA	334	70.63		
2ivsA	314	71.75		
8abp	306	72.59		
2c34A	116	75.09	b.1.26.1	129710
2ooiA	162	76.39		
3bqkA	360	81.80		
1ywnA	316	82.04	d.144.1.7	124161
1ordA	730	85.19	c.23.1.4,c.67.1.5,d.125.1.1	31274,34503,41124
1qhuA	460	86.19	b.66.1.1,b.66.1.1	27530,27531
1g9zA	152	87.67	d.95.2.1	60408
1oa8A	133	87.78	b.145.1.1	92698