# List of top-scoring protein chains for t2k-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2j6aA	141	0.8607		
2hf1A	68	7.327		
1e1aA	314	17.66	b.68.6.1	59155
1pjxA	314	19.54	b.68.6.1	104167
1qhuA	460	33.89	b.66.1.1,b.66.1.1	27530,27531
1g9zA	152	35.12	d.95.2.1	60408
2pkhA	148	36.87		
1k3tA	359	38.74	c.2.1.3,d.81.1.1	72022,72023
1rypI	222	39.72	d.153.1.4	41877
2o7tA	199	40.31		
1l7dA	384	40.76	c.2.1.4,c.23.12.2	77774,77775
1obfO	335	43.18	c.2.1.3,d.81.1.1	86768,86769
2oggA	152	43.60		
1g0u1	266	48.99		
2jwyA	168	55.53		
1pmaP	211	61.99	d.153.1.4	41863
1ypvA	313	63.06		
3ezmA	101	63.25	b.89.1.1	28395
2p3uA	52	71.45		
2occJ	59	72.35	f.23.4.1	43524
2ioyA	283	73.16		
1crwG	333	75.32	c.2.1.3,d.81.1.1	30026,39941
2q4uA	272	75.49		
1rypK	198	75.60	d.153.1.4	41879
1v54J	59	75.97	f.23.4.1	100331
2gnpA	266	79.71		
1rypD	241	80.77	d.153.1.4	41935
1z6eB	52	81.52	g.3.11.1	124519
1g0uE	234	82.16	d.153.1.4	41950
1u02A	239	85.94	c.108.1.15	107538
1iruK	201	86.04	d.153.1.4	71362
2pr3B	51	89.34		
1g0uC	243	89.94	d.153.1.4	41948