# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2j6aA	141	1.490		
2hf1A	68	6.593		
1e1aA	314	25.83	b.68.6.1	59155
1pjxA	314	31.80	b.68.6.1	104167
2pkhA	148	35.11		
2oggA	152	37.50		
1obfO	335	43.64	c.2.1.3,d.81.1.1	86768,86769
1k3tA	359	45.34	c.2.1.3,d.81.1.1	72022,72023
1l7dA	384	48.01	c.2.1.4,c.23.12.2	77774,77775
1g9zA	152	49.09	d.95.2.1	60408
2o7tA	199	50.38		
2jwyA	168	54.64		
1ypvA	313	57.85		
1crwG	333	59.27	c.2.1.3,d.81.1.1	30026,39941
2ioyA	283	59.61		
1rypI	222	69.62	d.153.1.4	41877
1qhuA	460	70.60	b.66.1.1,b.66.1.1	27530,27531
1g0u1	266	71.56		
2occJ	59	84.72	f.23.4.1	43524
2fa1A	160	86.05	d.190.1.2	133182